PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pbr016795.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Pyrus
Family ERF
Protein Properties Length: 200aa    MW: 21769.2 Da    PI: 5.2482
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pbr016795.1genomeCPETRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP255.71.2e-172473255
          AP2  2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55
                  y+GVr+++ +g+Wv+eIr+p+    +  r++lg+f t+e+Aa a++ a+ +l+g
  Pbr016795.1 24 TYRGVRRRS-SGKWVSEIREPK----KpNRIWLGTFPTPEMAAVAYDVAAIALKG 73
                 69****888.8*********94....468**********************9988 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.30.730.104.0E-302483IPR001471AP2/ERF domain
SMARTSM003803.6E-352487IPR001471AP2/ERF domain
PfamPF008472.5E-102473IPR001471AP2/ERF domain
PROSITE profilePS5103222.6692481IPR001471AP2/ERF domain
SuperFamilySSF541711.24E-202483IPR016177DNA-binding domain
CDDcd000182.64E-312583No hitNo description
PRINTSPR003676.2E-112536IPR001471AP2/ERF domain
PRINTSPR003676.2E-116383IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0050832Biological Processdefense response to fungus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 200 aa     Download sequence    Send to blast
MHATNTTTTS SSTTTSIVPG RHPTYRGVRR RSSGKWVSEI REPKKPNRIW LGTFPTPEMA  60
AVAYDVAAIA LKGQDAELNF PNSASSLPMP ASTSSRDIQA AASSAAAAMG VAIDRCSYSR  120
DEVQGGHHNV HQAHKTVDED DRFVLNHEFV DEDLIFNMPN VLVNMAEGML LSPPRLDIAG  180
DDAIDADQEQ GDQNLWKFY*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A8e-152081363ATERF1
3gcc_A8e-152081363ATERF1
Search in ModeBase
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009353175.11e-149PREDICTED: ethylene-responsive transcription factor ERF024-like
SwissprotQ9SJR02e-55ERF24_ARATH; Ethylene-responsive transcription factor ERF024
TrEMBLM5VT941e-88M5VT94_PRUPE; Uncharacterized protein
STRINGPOPTR_0006s02180.12e-72(Populus trichocarpa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF56232144
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G36450.19e-43ERF family protein